com.chemaxon.overlap.cli.util.pipeline

Class CloneCxnMolecule

java.lang.Object

com.chemaxon.overlap.cli.util.pipeline.CloneCxnMolecule

All Implemented Interfaces:

PipelineStep

public class CloneCxnMolecule
extends Object
implements PipelineStep

Clone Molecule object for subsequent modifications.

Constructor Summary

Constructors

Constructor and Description
CloneCxnMolecule()

Method Summary

Modifier and Type	Method and Description
static void	addToLinenote(LinenoteBuilder<PipelineStep> linenoteBuilder)
void	addToPipeline(PipelineContext pipeline) Wire step into the pipeline.
Molecule	cloneMolecule(Molecule m)
String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface com.chemaxon.overlap.cli.util.pipeline.PipelineStep

close, init

Constructor Detail

CloneCxnMolecule

public CloneCxnMolecule()

Method Detail

cloneMolecule

public Molecule cloneMolecule(Molecule m)

addToPipeline

public void addToPipeline(PipelineContext pipeline)

Description copied from interface: PipelineStep

Wire step into the pipeline. Contracts:

• Introduce the step using PipelineContext.addStep(com.chemaxon.overlap.cli.util.pipeline.PipelineStep)
• Introduce inputs and outputs. The actual inputs, outputs and their types might depend on the parameterization.
• Invoked before PipelineStep.init().
• Default parameterization is expected to be valid to invoke this method.
• Validity checks based on the parameterization might happen (consistency of the set parameters). Environment (other nodes, file system, etc) based verifications are expected to be executed in PipelineStep.init().
• Apart from interacting with the passed PipelineContext reference this method is side effect free
• Parameterization is expected to be not changed after invoking this method.

Specified by:

addToPipeline in interface PipelineStep

Parameters:

pipeline - Target pipeline.

toString

public String toString()

Overrides:

toString in class Object

addToLinenote

public static void addToLinenote(LinenoteBuilder<PipelineStep> linenoteBuilder)