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AbstractShapeComparator
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Align
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Application
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AsyncCallService.AsyncCallIdNotFoundException
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AtomTyping
Attachment
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AutoThrottle
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BaseShapeComparatorParameter
BatchedPagedProcessor
BemisMurckoClustering
BinaryLongCommonpart
BinaryLongCommonpartNormalized
BinaryLongComparisonContextFactory
BinaryLongDice
BinaryLongEuclidean
BinaryLongEuclideanNormalized
BinaryLongFpExtractor
BinaryLongManhattan
BinaryLongManhattanNormalized
BinaryLongPetke
BinaryLongSimpson
BinaryLongTanimoto
BinaryLongTversky
BinaryMetrics
BinaryVectorComparator
BinaryVectorComparator.Util
BinaryVectorComparisonContextFactory
BinaryVectorDescriptor
BinaryVectorDescriptorComparator
BinaryVectorDescriptorImpl
BinaryVectorDescriptorSerializer
BinaryVectorMetricFactory
BinaryVectorMetricFactory.ToLinenote
BinaryVectors
BinaryVectors.Endianness
BitArrayToBitSet
BorderedPane
BppManagerMBean
BppParameters
BruteForcePagedSimilarity
BufferedImageRenderer
BufferedImageRendering
BuilderClass
BuildStorage
BuildStorageStat
BvGenerator
BvGeneratorImpl
BvGeneratorImpl.Service
BvParameters
BvParameters.Builder
BvParameters.ConstructBvGenerator
BvParameters.StringFormat
CalculateDissimilarityDistributionService
CalculateOverlap
CalculateOverlap.OverlapResult
CalculateOverlapParameters
CalculateOverlapParameters.NoSplitter
CalculateOverlapStat
CalculateSelfOverlap
CalculateSelfOverlap.SelfOverlap
CancelObserver
CancelObserverImpl
CellField
CellFieldImpl
CellFieldImpl.ConstructWrapper
CellFields
CellFields.ConstructNewCellFieldImpl
Cfp
CfpBsWrapper
CfpComparator
CfpDsWrapper
CfpGenerator
CfpParameters
CfpParameters.Builder
CfpParameters.ConstructCfpGenerator
CfpTableReader
CfpTableReader.Factory
CfpTableReaderImpl
CfpTableReaderImpl.CfpReaderFactoryImpl
CharIterator
CharLayout
CharLayout.HA
ChemTermPropertyExtractor
ChemTermPropertyExtractorFactory
ChoiceDescriptor
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ChoiceParameterType
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ChoiceValueParameterParser
Clean2dWrapper
CliEntry
CliEntry2
CliInvocation
CliInvocationEnv
CliInvocationEnv2
CliInvocationSpec
CliInvocationSpec2
CliParam
CliParam.Converter
CliUtil
CloneCxnMolecule
CloseableAbstractIterator
CloseableIterator
CloseableIterators
CloseableLineIterator
CloseableSink
CloseableSinks
CloseableStringSink
Cluster
CmdlineContext
CmdlineContext.ExitWithNonZeroStatus
CmdlineContext.ExitWithZeroStatus
CmdlineUtils
CollectStorage
Column
Column
ColumnImpl
CompactStringStorage
CompactStringStorage.Builder
CompactStringStorageSerialization
ComparisonContext
ComparisonContextFactory
ComparisonContextImpl
ComparisonResult
Connect
ConsolePO
ConsolePO.Callback
ConstructCfpGeneratorImpl
ConstructEcfpGeneratorImpl
ConstructMaccsGeneratorImpl
ConstructPfGeneratorImpl
ConstructThreadLocalizedEcfpGeneratorImpl
ConstructThreadLocalizedPfGeneratorImpl
ContextJsTools
Contexts
ContextsProvider
ConversionRequest
ConversionResult
Converter
ConverterParameters
ConvertGroup
ConvertGroupParameters
CreateAllAbsentMms
CreateAllAbsentMmsParameters
CreateMms
CreateMmsParameters
CreateMmsStat
Creator
CreatorWrapper
CxnFormatsMolExporter
CxnFormatsMolImporter
DefaultCmdlineContext
DelegatingDeserializer
DescRes
DescResMostSimilarsSearch
DescResMostSimilarsSearch.MostSimilarSearchParams
DescResMostSimilarsSearch.MostSimilarsSearchResult
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DescribedResource
Description
Descriptor
Descriptor
DescriptorComparator
DescriptorContainer
DescriptorContainer.DescriptorContainerDeserializer
DescriptorGenerator
DescriptorInfo
DescriptorParameters
DescriptorPreChecker
DescriptorSerializer
DescriptorsInfo
DescriptorsResource
DescriptorStorage
DescriptorsWithIds
DescriptorsWithIdsImpl
DescriptorsWithMols
DescriptorsWithMolsImpl
DescriptorWrapper
Deserializer
Discovery
DissimilarityDistributionCalculation
DissimilarityDistributionRequest
DissimilarityDistributionResult
DissimilarityInput
DissimilarityTargetInfo
DrawMoleculeToRenderer
DRShape
DRShapeComparatorParameter
DRShapeComparatorParameter.Builder
DRShapeDescriptor
DRShapeGenerator
DRShapeGeneratorParameter
DRShapeGeneratorParameter.Builder
DRShapeHistogramComparator
DRShapeIntersectionComparator
DRShapeMetrics
DRShapeTanimotoComparator
DumpStorage
DumpStorage.DescOutFormat
DumpStorageParameters
Ecfp
EcfpAtomTypizers
EcfpBsWrapper
EcfpComparator
EcfpDsWrapper
EcfpGenerator
EcfpParameters
EcfpParameters.Builder
EcfpParameters.ConstructEcfpGenerator
EcfpTableReader
EcfpTableReader.Factory
EcfpTableReaderImpl
EcfpTableReaderImpl.EcfpReaderFactoryImpl
EHandler
ErrorHandler
ErrorHandlers
ErrorReport
ExecutableTask
ExecutionMonitoring
ExperimentalAddMoleculesRequest
ExperimentalAsyncCallsResource
ExperimentalRawFile
ExperimentalRawFileInfo
ExperimentalRawFilesContentResource
ExperimentalRawFilesInfo
ExperimentalRawFilesResource
ExperimentalResource
FeatureConfig
FeatureConfigProvider
FindMostSimilarsService
FirstToken
FixedKnnResultsImpl
FixedValueInvocationHandler
FlexibilityModeParameterBuilder
FloatsComparisonContextFactory
FloatsEuclid
FloatsEuclidSqr
FloatsExtractor
FloatsManhattan
FloatsMaxDiff
FloatsTanimoto
FloatsTversky
FloatVectorComparator
FloatVectorComparator.Util
FloatVectorComparisonContextFactory
FloatVectorDescriptor
FloatVectorDescriptorComparator
FloatVectorDescriptorImpl
FloatVectorMetricFactory
FloatVectorMetricFactory.ToLinenote
FloatVectorMetrics
ForwardingInvocationHandler
FpDiff
FpDiffParameters
FrameworkClustering
FrameworkClusteringResults
FrameworkClusteringResultsMolImpl
FrameworkClusteringResultsSmiImpl
FrameworkIndex
FvGenerator
FvGeneratorImpl
FvParameters
FvParameters.Builder
FvParameters.NumericRepresentation
FvParameters.SparseCompression
GarbageCollectorInfoDto
GenerateErrorResponse
GenerateMaccsFp
GenerMaccs
GetMoleculeName
GetSdfProperty
GridInfo
GridPane
GridRes
GridsInfo
GridsResource
GSearch
GsSearch
Guarded
Guarded.EnsureThat
Guarded.New
GuardedSerializableReturnValue
GuardedSingleArgument
Gui
Halign
HasBasicSizeinfo
HasSizeinfo
HeatmapBuilder
HeatmapRenderingParameters
HFlowPane
HierarchicCluster
HierarchicClustering
HierarchicClustering.Alignment
Histo
Histogram
IDBasedAssigner
IDBasedAssignerBuilder
IDBasedClusterBuilder
IDBasedClusterBuilderSpec
IDBasedHierarchicCluster
IDBasedHierarchicClusterBuidler
IDBasedHierarchicClustering
IDBasedSingleLevelClustering
Identity
IdGenerator
IdGeneratorFactory
Imports
ImportStorage
ImportStorageParameters
IndexedAttachmentGroup
IndexedAttachmentGroupImpl
IndexedKnnResultsImpl
IndexProjector
IndexProjectors
IndexProjectors.IndexProjectorBuilder
IndexProjectors.IndexProjectorMcb
IndirectSerializable
InputStreamStatCollector
InstanceWrapper
InstantiateChoice
JacksonJsonMappingExceptionMapper
JacksonJsonParseExceptionMapper
JacksonUnrecognizedPropertyExceptionMapper
JettyStarter
JettyStarter.ServerWrapper
JettyStarter.SslKeystoreSpec
JsEval
JsEvalParameters
JsLineFilter
Knn
KnnData
KnnInfo
KnnRes
KnnResource
KnnResults
KnnResultsBuilder
KnnServlet
KnnsInfo
KnnTableLabelEntry
KnnTableLabels
LanceWilliamsAlgorithm
LanceWilliamsMerge
LanceWilliamsMerges
LanceWilliamsMerges.AverageLinkage
LanceWilliamsMerges.CompleteLinkage
LanceWilliamsMerges.SingleLinkage
LanceWilliamsMerges.Wards
Launch
LevelAssigner
LinearHistogram
LinearHistogramBuilder
LinearScaler
LinearScalerImpl
LinearScalerUtil
Linenote
LinenoteBuilder
LinenoteChoiceDto
LinenoteChoiceParameterDto
LinenoteChoiceParameterValueDto
LinenoteDto
Linenotes
ListenableObserver
LoadingStatusDto
LookupParamConverterProvider
Maccs
Maccs166BinaryString
MaccsBenchmark
MaccsComparator
MaccsGenerator
MaccsParameters
MaccsParameters.Builder
MaccsParameters.ConstructMaccsGenerator
MadfastImport
MadfastImportParameters
MadfastImportParameters.NoSplitter
MadfastImportStat
Mark
MasterMoleculeStorage
MasterMoleculeStorageImpl
MasterMoleculeStorageSerialization
MasterStorage
MasterStorages
MasterStorages.MasterStorageBuilder
MasterStorages.MoleculeCallbackBuilder
MasterStringStorage
MDReaderFactory
MDTableReader
MemoizedSparseCollection
MemoizingIterator
MemoryPoolInfoDto
MemoryUsageDescDto
Memstat
MetaResource
MetaServlet
MetricFactory
MetricFactory.ToLinenote
MetricMetadata
MolConverter
MoleculeAwareLog
MoleculeAwareLogFactory
MoleculeCallback
MoleculeCallbacks
MoleculeCallbacks.CountingMoleculeCallback
MoleculeCallbacks.IndexToNameStoringCallback
MoleculeContainer
MoleculeContainerImpl
MoleculeFrameworks
MoleculeIds
MoleculeInfo
MoleculeIo
MoleculeParsingMessageBodyReader
MoleculeProp
MoleculePropInfo
MoleculePropRange
MoleculeProps
Molecules
MoleculeSetInfo
MoleculeSetsInfo
MoleculesResource
MolInput
MolInputBuilder
MolInputImpl
MolnamePropertyExtractor
MolnamePropertyExtractorFactory
MolProp
MolsContext
MolsRes
MolsServlet
MostSimilarsRequest
MostSimilarsResult
MU
MU.BondList
MultiConversionRequest
MultiConversionResult
MultiInputCloseableIterator
NnResults
NoOverflowAutoDoneProgressObserver
NormalizeUriFilter
ObservableProgressObserver
OneKeeperPartialResultHolder
OptErrorH
OptionalSource
OrderedElement
OrderedElements
OrderedInputProcessingException
OutputStreamStatCollector
OverlapAnalysisContext
OverlapAnalysisContextFactory
OverlapAnalysisContextWrapper
OverlapVersion
OverlapVersionInfo
PagedBuilder
PagedDescriptorImport
PagedDescriptorImportParameters
PagedDescriptorStorage
Paint
Parameter
ParameterBuilder
ParameterizedContextFactory
ParameterSetMode
ParameterWrapper
ParameterWrapper.ParameterType
Parametrized
ParseCustomToDescriptor
ParseCustomToUnguarded
ParsedDescriptorResult
ParsedDescriptorResultHandler
ParsedUnguardedResult
ParsedUnguardedResultHandler
ParsedUnguardedWithMolResult
ParsedUnguardedWithMolResultHandler
ParseRes
ParseSdf
ParseSdfParameters
ParseStructureRecordToUnguarded
ParseStructureRecordToUnguardedWithMol
PartialResultConsumer
PartialResultHolder
PartialResultProvider
Pf2dWrapper
PfComparator
PfComparatorImpl
PfGenerator
PfParameters
PfParameters.Builder
PfParameters.ConstructPfGenerator
PfTableReader
PfTableReader.Factory
PfTableReaderImpl
PfTableReaderImpl.PfReaderFactoryImpl
PharmacophoreFP
PharmacophoreFPImpl
PipelineContext
PipelineRunner
PipelineRunner.Connection
PipelineRunner.IO
PipelineRunner.IOType
PipelineStep
PmapperFeature
PmapperRequest
PmapperResponse
PostOrderDfsVisitor
PrepareMolecules
PrepareMoleculesParameters
Processor
ProcessorImpl
Processors
Prof
ProfRes
ProfResResource
ProfSnapshot
ProfSnapshot.GarbageCollector
ProfSnapshot.MemoryPool
ProfSnapshot.MemoryUsageDesc
ProfSnapshotDto
ProgressiveDeserializer
ProgressiveSerialization
ProgressiveSerializationImpl
ProgressiveSerializationImpl.DeserializerImpl
ProgressiveSerializeToFile
ProgressObservable
ProgressObserver
ProgressObservers
PropertyCollectorCallback
PropertyExtractor
PropertyExtractorFactory
PropertyExtractors
Px2d
Range
RangeSpec
RealTimeSeaarchGuiParmateres
RealTimeSeaarchGuiParmateres.NoSplitter
RealTimeSearchGui
RealTimeSearchGuiContext
Reflect
Reflect.MetricFactory
Reflect.Proxied
RemoveSidechainsMolwalk
RemoveSidechainsSc
Renderer
Rendering
ResourceClass
ResourceClassInfoDto
ResourceClassInfosDto
ResourceInfo
ResultHandler
ReturnValueTransformingInvocationHandler
RgDefiniton
RgDefiniton.EnumeratedExtension
RgDefiniton.ScoredExtension
RgFrag
RingAtomBs
RingBondBs
Row
RowBuilder
RowImpl
Scaffold
ScaffoldExtension
ScaffoldExtensionBuilder
ScalarFilter
ScaledBytesFloatVectorDescriptorImpl
ScaledBytesFvComparisonContextFactory
ScaledBytesFvEuclid
ScaledBytesFvExtractor
ScaledBytesFvTanimoto
ScaledFvDescriptor
ScaledFvDescriptorFactory
ScaledFvDescriptorGenerator
ScaledShortsFloatVectorDescriptor
ScaledShortsFvCoparisonContextFactory
ScaledShortsFvEuclid
ScaledShortsFvExtractor
SdfPropertyExtractor
SdfPropertyExtractorFactory
SdfSegmenter
SearchStorage
SearchStorage.SearchMode
SearchStorageParameters
SearchStorageStat
SecondToken
SeekableFileOutput
Segmenter
Segmenters
SelfKnnFilter
SelfKnnFilterImpl
SelfKnnFilters
SelfOverlapGui
SelfOverlapGuiContext
SelfOverlapGuiParmateres
SelfOverlapServlet
SequentialIdGenerator
SerializableFunction
SerializableInvocationHandler
SerializationUtil
Serializer
SerializeTask
SerializingComparisonContextFactory
SerializingUnguardedDissimilarityCalculator
SerializingUnguardedExtractor
ServerFeature
ServiceUtil
Severity
Shape
ShapeComparator
ShapeComparatorException
ShapeComparatorParameter
ShapeComparatorParameter.Builder
ShapeComparisonResult
ShapeDescriptor
ShapeFunction
ShapeGenerator
ShapeGeneratorException
ShapeGeneratorParameter
ShapeGeneratorParameter.Builder
ShapeIntersectionComparator
ShapeMetrics
ShapeTanimotoComparator
SimilarityResult
SimilarityResultImpl
SimilarityResults
SimilarityResultsImpl
SimpleComparisonResult
SimpleDescribedResource
SimpleDfsVisitor
SimpleErrorHandling
SimpleFrameworkAssociation
SimplePane
SimplePaneFactory
SimplePartialResultHolder
SingleArgumentTransformingInvocationHandler
SingleLevelClustering
SingleLinkage
SingleMethodForwardingInvocationHandler
SingleThreadDescriptorGenerator
SingleThreadDescriptorGenerator.IDLOC
SingleThreadDescriptorGenerator.IDSEPCHAR
SingleThreadDescriptorGenerator.IDSRC
SingleThreadedDescriptorGeneratorParameters
SingleThreadedDescriptorGeneratorStat
Sink
SizeInfoDetailDto
SizeInfoDto
SizeInfoMethod
SlowlyDeserializingMms
SlowUnguardedComparator
SmaInterpreter
SmaPieces
SmilesMemoizingMoleculeIterator
SmilesSegmenter
SphereExclusion
SplitObserver
Splitting
StandardizerWrapper
StandardizerWrappers
StartupHandler
StatisticsDto
StatisticsResource
StatPO
StatRes
StatResResource
Status
StatusFilter
Strings
Strings.Stringpoint
StructureRecord
StructureRecord
StructureRecordIterator
StructureRecordIterators
StructureRecords
SubPane
SubProgressObserver
Task
TaskDto
TaskPresenter
TaskService
TextFileInput
TextFileOutput
TextTableBuilder
ThreadLocalizedEcfpParameters
ThreadLocalizedEcfpParameters.Builder
ThreadLocalizedEcfpParameters.ConstructThreadLocalizedEcfpGenerator
ThreadLocalizedPfParameters
ThreadLocalizedPfParameters.Builder
ThreadLocalizedPfParameters.ConstructThreadLocalizedPfGenerator
Timer
TimerStatistics
ToLines
ToSdfs
ToStrings
TransformMolecule
TransformMolecule.Method
TverskyParameters
TverskyParameters.Builder
U
UnguardedContext
UnguardedContextImpl
UnguardedDissimilarityCalculator
UnguardedExtractor
UnguardedPagedOverlap
UnguardedPagedStorage
UnguardedPagedStorageImpl
Unguardeds
UnguardedVisitor
UnitPathAssigner
Updater
Util
Util
Util
Util
Util.StringScatterPlot
Utils
Utils
UUIDGenerator
V3D
Valign
VFlowPane
WuiBadRequestException
WuiException
WuiExceptionMapper
WuiForbiddenException
WuiInternalServerErrorException
WuiNotFoundException
XmlUtils