com.chemaxon.overlap.io

Interface StandardizerWrapper

All Superinterfaces:

Serializable

All Known Implementing Classes:

RemoveSidechainsMolwalk, RemoveSidechainsSc

@Beta
 @PublicAPI
public interface StandardizerWrapper
extends Serializable

Wrap Standardizer for the similarity subsystem.

The wrapper must be stateless, thread safe and free from side effects. Implementations must be prepared to concurrent invocations of the standardize(chemaxon.struc.Molecule) method from different threads, with different Molecules on the same StandardizerWrapper reference.

To create a thread safe wrapper for a Standardizer object the utilities in StandardizerWrappers can be used.

Note that implementations are expected to be Serializable.

Please note that this interface is marked with Beta annotation, so it can be subject of incompatible changes or removal in later releases.

Method Summary

Modifier and Type	Method and Description
StandardizerWrapper	and(StandardizerWrapper w) Create a new wrapper representing an additional step.
void	standardize(Molecule m) Invoke represented transformation.

Method Detail

standardize

void standardize(Molecule m)

Invoke represented transformation.

Parameters:

m - Molecule to modify.

Throws:

IllegalArgumentException - in case of standardization problem

and

StandardizerWrapper and(StandardizerWrapper w)

Create a new wrapper representing an additional step.

Parameters:

w - Further step to represent

Returns:

New instance